Steve Watt has agreed a deal for the 2015/16 season.
The 30-year-old will be back for the National League South campaign, which will see three derbies against Dartford, Ebbsfleet and newly-promoted Margate.
The club captain joined the Stones on loan in February 2013, signing a permanent deal a month later.
In 2014/15, he made 37 appearances and chipped in with five goals. One of the highlights in an action-packed season was receiving the Ryman Premier Division trophy from league vice chairman Nick Robinson in front of a capacity crowd at the Gallagher Stadium.